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Copy path.mypy.ini
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85 lines (62 loc) · 1.51 KB
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[mypy]
# equivalent to "files" in .pre-commit-config.yaml
files = Bio,BioSQL
strict_equality = True
extra_checks = True
#check_untyped_defs = True
#disallow_untyped_calls = True
disallow_incomplete_defs = True
#disallow_untyped_defs = True
no_implicit_reexport = True
show_error_context = True
show_column_numbers = True
show_error_codes = True
pretty = True
warn_redundant_casts = True
#warn_return_any = True
warn_unused_configs = True
[mypy-Bio/PDB/*]
disallow_incomplete_defs = False
[mypy-Bio.PDB.ccealign]
ignore_missing_imports = True
[mypy-Bio.PDB._bcif_helper]
ignore_missing_imports = True
[mypy-Bio.PDB.ic_rebuild]
ignore_errors = True
[mypy-Bio.PDB.internal_coords]
ignore_errors = True
[mypy-Bio.PDB.kdtrees]
ignore_missing_imports = True
[mypy-Bio.PDB.PDBMLParser]
ignore_errors = True
[mypy-Bio.PDB.PICIO]
ignore_errors = True
[mypy-igraph.*]
ignore_missing_imports = True
[mypy-msgpack.*]
ignore_missing_imports = True
[mypy-mmtf.*]
ignore_missing_imports = True
[mypy-numpy.*]
ignore_missing_imports = True
[mypy-reportlab.*]
ignore_missing_imports = True
[mypy-scipy.*]
ignore_missing_imports = True
[mypy-networkx.*]
ignore_missing_imports = True
[mypy-pylab.*]
ignore_missing_imports = True
[mypy-matplotlib.*]
ignore_missing_imports = True
[mypy-PIL.*]
ignore_missing_imports = True
[mypy-rdflib.*]
ignore_missing_imports = True
[mypy-MySQLdb.*]
ignore_missing_imports = True
[mypy-xml.sax.expatreader.*]
ignore_missing_imports = True
[mypy-Bio.pairwise2.*]
# deprecated module
ignore_errors = True