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Cannot build pkgdown site because bioconductor is down 🤦🏼 #3030
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Cannot build pkgdown site because bioconductor is down and this package has nothing to do with bioconductor!
> pkgdown::build_site()
── Installing package test into temporary library ──────────────────────────
── Building pkgdown site for package test ─────────────────────────────────
Reading from: /Users/royfr474/Downloads/test
Writing to: /Users/royfr474/Downloads/test/docs
── Sitrep ──────────────────────────────────────────────────────────────────────
✔ URLs ok.
✔ Favicons ok.
✔ Open graph metadata ok.
✔ Articles metadata ok.
✔ Reference metadata ok.
── Initialising site ───────────────────────────────────────────────────────────
── Building home ───────────────────────────────────────────────────────────────
✖ Icon "fa-home fa-lg" lacks an `aria-label`.
ℹ Specify `aria-label` to make the icon accessible to screen readers.
ℹ Learn more in `vignette(pkgdown::accessibility)`.
This message is displayed once every 8 hours.
Writing `authors.html`
Reading AGENTS.md
Writing `AGENTS.html`
Reading LICENSE.md
Writing `LICENSE.html`
Writing `LICENSE-text.html`
Error:
! in callr subprocess.
Caused by error in `httr2::req_perform(req)`:
! Failed to perform HTTP request.
Caused by error in `curl::curl_fetch_memory()`:
! Timeout was reached [www.bioconductor.org]:
Connection timed out after 10002 milliseconds
ℹ See `$stderr` for standard error.
Type .Last.error to see the more details.
Sidenote: pkgdown attempts to render 'AGENTS'.md' even if it's added to .Rbuildignore. Note sure if LICENSE.md needs to be rendered either.
> packageVersion("pkgdown")
[1] ‘2.2.1’
> sessionInfo()
R version 4.5.2 (2025-10-31)
Platform: aarch64-apple-darwin20.0.0
Running under: macOS Tahoe 26.7.1
Matrix products: default
BLAS/LAPACK: /opt/homebrew/Caskroom/miniforge/envs/r-4.5-arm/lib/libopenblas.0.dylib; LAPACK version 3.12.0
locale:
[1] en_GB.UTF-8/en_GB.UTF-8/en_GB.UTF-8/C/en_GB.UTF-8/en_GB.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] jsonlite_2.0.0 compiler_4.5.2 Rcpp_1.1.1-1.1 rcmdcheck_1.4.0
[5] callr_3.7.6 later_1.4.8 yaml_2.3.12 fastmap_1.2.0
[9] R6_2.6.1 pak_0.10.0 curl_7.0.0 knitr_1.50
[13] tibble_3.3.1 desc_1.4.3 rprojroot_2.1.1 pillar_1.11.1
[17] rlang_1.2.0 cachem_1.1.0 xfun_0.56.5 fs_2.1.0
[21] pkgload_1.4.1 memoise_2.0.1 cli_3.6.5 pkgdown_2.2.1
[25] withr_3.0.2 magrittr_2.0.5 ps_1.9.3 digest_0.6.39
[29] processx_3.9.0 rstudioapi_0.17.1 remotes_2.5.0 devtools_2.4.6
[33] lifecycle_1.0.5 prettyunits_1.2.0 vctrs_0.7.3 evaluate_1.0.5
[37] glue_1.8.1 xopen_1.0.1 sessioninfo_1.2.3 pkgbuild_1.4.8
[41] rmarkdown_2.30 purrr_1.2.2 tools_4.5.2 usethis_3.2.1
[45] pkgconfig_2.0.3 ellipsis_0.3.2 quarto_1.5.1 htmltools_0.5.9
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