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format: jb-book

root: README

parts:

- caption: Getting started

chapters:

- file: docs/UseOverviewGuide

- file: docs/installation

sections:

# - file: docs/recipes/installTips

- file: docs/docker

# - file: docs/quick-start/index

# sections:

- caption: Main workflows overview

chapters:

- file: docs/main-workflows/user-guide

sections:

- file: docs/quick-start/single_animal_quick_guide

- file: docs/quick-start/tutorial_maDLC

- file: docs/main-workflows/multi-animal-tracking

# - file: docs/standardDeepLabCut_UserGuide

# - file: docs/maDLC_UserGuide

- file: docs/Overviewof3D

- caption: GUI workflow

chapters:

- file: docs/gui/PROJECT_GUI

sections:

- file: docs/beginner-guides/beginners-guide

- file: docs/beginner-guides/manage-project

- file: docs/beginner-guides/labeling

- file: docs/beginner-guides/Training-Evaluation

- file: docs/beginner-guides/video-analysis

- file: docs/gui/napari_GUI

sections:

- file: docs/gui/napari/basic_usage

- file: docs/gui/napari/advanced_usage

- file: docs/gui/napari/tracking/basic_usage

- caption: Notebooks & Demos

chapters:

- file: docs/notebooks/your_data

sections:

- file: examples/COLAB/COLAB_YOURDATA_SuperAnimal

- file: examples/COLAB/COLAB_YOURDATA_TrainNetwork_VideoAnalysis

- file: examples/COLAB/COLAB_YOURDATA_maDLC_TrainNetwork_VideoAnalysis

- file: docs/notebooks/main_demos

sections:

- file: examples/COLAB/COLAB_DEMO_SuperAnimal

- file: examples/COLAB/COLAB_DEMO_mouse_openfield

- file: examples/COLAB/COLAB_3miceDemo

- file: examples/COLAB/COLAB_HumanPose_with_RTMPose

- file: docs/notebooks/extra

sections:

- file: examples/COLAB/COLAB_transformer_reID

- file: examples/COLAB/COLAB_BUCTD_and_CTD_tracking

- file: examples/JUPYTER/Demo_3D_DeepLabCut

- file: examples/COLAB/COLAB_DLC_ModelZoo

- caption: DeepLabCut 3.0 - PyTorch guides

chapters:

- file: docs/pytorch/index

sections:

- file: docs/pytorch/user_guide.md

- file: docs/pytorch/pytorch_config.md

- file: docs/pytorch/architectures.md

- file: docs/pytorch/Benchmarking_shuffle_guide

- caption: Advanced, Performance & Live

chapters:

- file: docs/ModelZoo

sections:

- file: docs/recipes/UsingModelZooPupil

- file: docs/dlc-live/deeplabcutlive

- file: docs/dlc-live/dlc-live-gui/index

sections:

- file: docs/dlc-live/dlc-live-gui/quickstart/install

- file: docs/dlc-live/dlc-live-gui/user_guide/overview

- file: docs/dlc-live/dlc-live-gui/user_guide/cameras_backends/camera_support

sections:

- file: docs/dlc-live/dlc-live-gui/user_guide/cameras_backends/opencv_backend

- file: docs/dlc-live/dlc-live-gui/user_guide/cameras_backends/basler_backend

- file: docs/dlc-live/dlc-live-gui/user_guide/cameras_backends/aravis_backend

- file: docs/dlc-live/dlc-live-gui/user_guide/cameras_backends/gentl_backend

- file: docs/dlc-live/dlc-live-gui/user_guide/camera_config

- file: docs/dlc-live/dlc-live-gui/user_guide/misc/misc_landing

sections:

- file: docs/dlc-live/dlc-live-gui/user_guide/misc/modelzoo_downloads

- file: docs/dlc-live/dlc-live-gui/user_guide/misc/timestamp_format

- file: docs/benchmark

- file: docs/recipes/TechHardware

- caption: Development

chapters:

- title: Developer Documentation

url: https://deeplabcut.github.io/DeepLabCut/dev/

- caption: Additional guides (Recipes)

chapters:

- file: docs/recipes/index

sections:

- file: docs/recipes/publishing_notebooks_into_the_DLC_main_cookbook

- file: docs/HelperFunctions

- file: docs/convert_maDLC

- file: docs/recipes/OtherData

- file: docs/recipes/io

- file: docs/recipes/nn

- file: docs/recipes/post

- file: docs/recipes/BatchProcessing

- file: docs/recipes/DLCMethods

- file: docs/recipes/ClusteringNapari

- file: docs/recipes/OpenVINO

- file: docs/recipes/flip_and_rotate

- file: docs/recipes/pose_cfg_file_breakdown

# - file: docs/course

- file: docs/dlc-utils/index

sections:

- file: docs/dlc-utils/XROMM/usage

- caption: Project & Community

chapters:

- file: docs/MISSION_AND_VALUES

- file: docs/roadmap

- file: docs/Governance

- file: CONTRIBUTING

- file: docs/citation