USDA-ARS Genomics and Bioinformatics Research Unit

Pinned Loading

1. itsxpress itsxpress Public

   Software to trim the ITS region of FASTQ sequences for amplicon sequencing analysis

   Python 20 12

2. GuideMaker GuideMaker Public

   GuideMaker: Software to design CRISPR-Cas guide RNA pools in non-model genomes

   Jupyter Notebook 12 5

3. micrompn micrompn Public

   MicroMPN: A Python command line program for automating most probable number (MPN) estimates in microtiter plates

   Python 1 2

4. PanPipes PanPipes Public

   Test sets and pipeline scripts for pan-genomic graph analysis

   Python 18 2

5. branchwater-web branchwater-web Public

   web app for search of SRA with Mastiff

   HTML 2