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bug fix: missing images during evaluation by n-poulsen · Pull Request #2570 · DeepLabCut/DeepLabCut · GitHub
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bug fix: missing images during evaluation #2570

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Merged
MMathisLab merged 3 commits into from
Apr 30, 2024
Merged

bug fix: missing images during evaluation #2570

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ddf2968
bug fix: maDLC benchmark evaluation when there are missing images
Apr 30, 2024
9d0e463
dlc missing data fix
Apr 30, 2024
89e8475
made more robust
Apr 30, 2024
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dlc missing data fix
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Niels Poulsen
Niels Poulsen committed Apr 30, 2024
commit 9d0e463409cdd0f8b327ca5ddbb0bba311eff92a
13 changes: 11 additions & 2 deletions deeplabcut/pose_estimation_tensorflow/lib/crossvalutils.py
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Expand Up @@ -250,11 +250,20 @@ def _benchmark_paf_graphs(
all_assemblies.append((ass.assemblies, ass.unique, ass.metadata["imnames"]))
if split_inds is not None:
oks = []

# get the indices of the images in the training set
img_indices = [img_data[1]["index"] for img_data in data.items()]
for inds in split_inds:
ass_gt = {k: v for k, v in ass_true_dict.items() if k in inds}
ass_gt = {
k: v for k, v in ass_true_dict.items() if img_indices[k] in inds
}
ass_pred = {
k: v for k, v in ass.assemblies.items() if img_indices[k] in inds
}

oks.append(
evaluate_assembly(
ass.assemblies,
ass_pred,
ass_gt,
oks_sigma,
margin=margin,
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