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Adding cropping to pose_estimation_pytorch/apis/analyze_videos.py by YankoFelipe · Pull Request #2737 · DeepLabCut/DeepLabCut · GitHub
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Adding cropping to pose_estimation_pytorch/apis/analyze_videos.py #2737

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Merged
n-poulsen merged 3 commits into from
Sep 30, 2024
Merged

Adding cropping to pose_estimation_pytorch/apis/analyze_videos.py #2737

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9e4495e
Adding cropping to pose_estimation_pytorch/apis/analyze_videos.py
YankoFelipe Sep 9, 2024
ef457d8
Merge branch 'pytorch_dlc' into pytorch_dlc_analyze_crop
MMathisLab Sep 13, 2024
25f11bd
Adding docstring plus addressing comments
YankoFelipe Sep 16, 2024
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Adding docstring plus addressing comments
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@YankoFelipe
YankoFelipe committed Sep 16, 2024
commit 25f11bdf492ba38e77df8a44d3d4524562f50cd7
8 changes: 8 additions & 0 deletions deeplabcut/pose_estimation_pytorch/apis/analyze_videos.py
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Expand Up @@ -225,6 +225,11 @@ def analyze_videos(
identity_only: sub-call for auto_track. If ``True`` and animal identity was
learned by the model, assembly and tracking rely exclusively on identity
prediction.
cropping: list or None, optional, default=None
List of cropping coordinates as [x1, x2, y1, y2].
Note that the same cropping parameters will then be used for all videos.
If different video crops are desired, run ``analyze_videos`` on individual
videos with the corresponding cropping coordinates.

Returns:
The scorer used to analyze the videos
Expand Down Expand Up @@ -257,6 +262,9 @@ def analyze_videos(
cfg, model_cfg, snapshot_index, detector_snapshot_index,
)

if cropping is None and cfg.get("cropping", False):
cropping = cfg["x1"], cfg["x2"], cfg["y1"], cfg["y2"]

# Get general project parameters
bodyparts = model_cfg["metadata"]["bodyparts"]
unique_bodyparts = model_cfg["metadata"]["unique_bodyparts"]
Expand Down