Repository navigation

All pull requests

feat(classify): support weights-only loading and export (#663)
#671saroshkumar-ops opened Nov 3, 2026
6
feat(download): use huggingface_hub client for Hugging Face models (#664)
#669saroshkumar-ops opened Oct 22, 2026
19
Make image processing tests deterministic
#668AlokDubey25 opened Oct 20, 20267 tasks
1
Fix CI model cache invalidation
#660aymuos15 opened Sep 7, 2026Contributor
8
Register the pretrained 2D models
#656aymuos15 opened Aug 14, 2026Contributor
5
Expose 2D/3D selection in the napari widgets
#655aymuos15 opened Aug 14, 2026Contributor
Add 2D network training to the train CLI
#654aymuos15 opened Aug 14, 2026Contributor
Support 2D cell candidate detection
#653aymuos15 opened Aug 14, 2026Contributor
Curated tiff directories in yaml file should be relative to yaml file
#634matham opened Jun 28, 2026Contributor4 of 7 tasks
Expose augmentation params in napari and cli
#632matham opened Jun 22, 2026Contributor5 of 7 tasks
Show number of cells already curated
#630matham opened Jun 21, 2026Contributor4 of 7 tasks
Pass cell metadata through napari.
#629matham opened Jun 21, 2026Contributor4 of 7 tasks
Log the proportion of cells classified
#628matham opened Jun 21, 2026Contributor3 of 7 tasks
Share workers between epochs
#627matham opened Jun 21, 2026Contributor3 of 7 tasks
1
Add status label below progress bar
#611sGTetjn opened Mar 31, 20263 of 7 tasks
fix: allow detection-only runs without background channel
#610NiShITa-code opened Mar 29, 20264 of 7 tasks
2
Fix #605: make background_array optional when skip_classification=True
#607KpradeepKumar25 opened Mar 21, 20263 of 7 tasks
2
Remove unused detection constants
#604Gautghadi-1605 opened Mar 14, 20261 of 4 tasks
Refactor detection input validation into helper function
#600mani6409 opened Mar 10, 20262 of 7 tasks
Add tests for download CLI to improve coverage
#599mani6409 opened Mar 10, 2026
2
Fix crash when no cell candidates are detected
#595tanishaa7 opened Feb 28, 2026
4
Vectorize numpy operations in structure splitting
#592aymuos15 opened Feb 19, 2026Contributor4 of 5 tasks
6

Pull requests