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| # TODO: sklearn.utils.validation.check_array does not support it | ||
| # def pandas_nullable_constructor(obj) -> IntoDataFrame: | ||
| # return pd.DataFrame(obj).convert_dtypes(dtype_backend="numpy_nullable") # type: ignore[no-any-return] | ||
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| # TODO: sklearn.utils.validation.check_array does not support it | ||
| # def pandas_pyarrow_constructor(obj) -> IntoDataFrame: | ||
| # return pd.DataFrame(obj).convert_dtypes(dtype_backend="pyarrow") # type: ignore[no-any-return] |
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This is an interesing one.
To reproduce:
import pandas as pd
from sklearn.utils.validation import check_array
df = pd.DataFrame({"alpha": ["a", "a", "b"], "beta": [1, 2, 1]})
df = df.convert_dtypes(dtype_backend="pyarrow")
# or
# df = df.convert_dtypes(dtype_backend="numpy_nullable")
check_array(df, dtype=None)Did you encounter this already @FBruzzesi? Maybe in scikit-lego?
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I believe scikit-lego was very early days of Narwhals, and we are not testing with different pandas dtype_backend 🙈
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The root cause is that _validate_and_reformat_input routes X through check_array, which materializes to NumPy — so a string[pyarrow] (or nullable) column can't be cast and it blows up. It's not really fixable as long as validation goes through check_array; the proper fix is to validate via narwhals instead, which is out of scope here.
After merging main, the shared test/conftest.py now also parametrizes over the nullable/pyarrow dtype backends (other modules rely on them). To keep that coverage without breaking the utils tests, I added a local test/unit/utils/conftest.py that narrows constructor to the backends check_array actually supports (pandas, polars, native pyarrow table). I can open a follow-up issue to track proper support for pandas extension-dtype backends in input validation. Wdyt?
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Hi @EdAbati, just acknowledging today that I saw this PR! I think that the frequency of my engagement here is not enough to keep everything up to date on the spin-off branch fully unfortunately, I was expecting a different situation these weeks but here we are 😄. We have a maintainer meeting tomorrow, I might discuss to move the merges directly into |
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No problem at all @TamaraAtanasoska :) I changed the base branch to |
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Apologies for the delay, but I finally found time to address the comments! 😄 Thank you for the review everyone, please let me know if there is anything else that doesn't look right |
| # TODO: remove this once we supports all narwhals inputs in this module | ||
| default_backend=nw.Implementation.PANDAS, |
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I had to add this in places were narwhals is not yet supported. Since we import polars in the tests, it becomes the default backend.
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This is fine as a temporary workaround and the TODO makes the intent clear, so no objection to keeping it for this PR. The only reason it's needed is the .values calls right after, which are pandas-only. If we swap those for np.asarray(y_true) / np.asarray(sensitive_features) (works on both pandas and polars Series), the forced backend goes away entirely. Happy to make that small change here or leave it for the follow-up that removes these temporary shims — your call.
| if get_polars(): | ||
| return Implementation.POLARS | ||
| if get_pandas(): | ||
| return Implementation.PANDAS | ||
| if get_pyarrow(): | ||
| return Implementation.PYARROW | ||
| raise ImportError( | ||
| "No supported dataframe backend found. Please install either polars, pandas or pyarrow." | ||
| ) |
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is everyone happy about this priority?
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One thing to weigh: this default only kicks in when inputs aren't dataframes/series (e.g. NumPy) and no explicit backend is passed — it decides what type comes back out. With polars first, a user passing NumPy arrays gets polars Series back whenever polars is installed, which is a behavior shift for our historically pandas-centric users (and it's also what makes the default_backend=PANDAS workaround in the other thread necessary in tests).
My inclination is pandas > polars > pyarrow for backward compatibility, unless we explicitly want to push polars as the default output. Since it's a user-facing policy call, this feels like a good one to confirm with @fairlearn/fairlearn-maintainers @FBruzzesi, thoughts? I am fine with it either way.
Resolve conflicts after main raised min scikit-learn to 1.6 (fairlearn#1654) and reorganized changelogs: - fairlearn/utils/_fixes.py: deleted (compat shim removed upstream); _input_validation now imports check_array directly from sklearn.utils.validation. - test/conftest.py: kept main's version (pandas nullable + pyarrow extension-dtype constructors). Added test/unit/utils/conftest.py overriding 'constructor' to backends supported by check_array (pandas, polars, native pyarrow), since pandas pyarrow-backed string columns can't be converted by check_array. - docs: took main's v0.13.0.rst; moved the PR 1533 changelog entry into v0.15.0.rst under a new 'Narwhals integration' section. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Resolve conflict in fairlearn/utils/_input_validation.py: - Imports: adopt main's 'from collections.abc import Sequence' and keep 'from typing import Any' (still used by _standardize_features). - Kept the narwhals-based result_y construction and all_to_native return over main's pandas-only versions (core of this PR). - Kept the hardcoded _MESSAGE_SENSITIVE_FEATURES_NONE string rather than reintroducing the _KW_SENSITIVE_FEATURES constant that this PR removed when it switched to an explicit sensitive_features parameter. Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Description
Towards #1522
(thanks @StefanieSenger for your refactoring PR, made this work way easier :) )
This PR makes the
utils _input_validations.pynarwhals compatible. Since all the rest doesn't expectnarwhalsyet, I convert everything to native before the return. This should be updated in the future :)FYI @TamaraAtanasoska I made the PR to
narwhals-integrationthat is behindmain(but branched ofmain): that's why you see some unrelated commits. We should updatenarwhals-integrationto see a cleaner diff.Tests
Documentation
Screenshots
Tagging the narwhalifying experts @FBruzzesi @MarcoGorelli for suggestions on how to improve this